STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000033818TIL domain-containing protein. (86 aa)    
Predicted Functional Partners:
LOC110002727
Uncharacterized protein.
    
 0.948
LOC109982950
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.897
LOC109981009
Glycoprotein IX (platelet).
   
 0.884
gp1bb
Glycoprotein Ib platelet subunit beta.
   
 0.884
LOC109981973
Integrin beta; Belongs to the integrin beta chain family.
   
 0.863
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.862
itgb4
Integrin beta.
    
 0.862
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.862
ENSLBEP00000004906
LRRCT domain-containing protein.
    
 0.859
LOC109987749
Si:ch211-117l17.7.
    
 0.859
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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