Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ddx51 | drosha | ENSLBEP00000034028 | ENSLBEP00000008683 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | Drosha ribonuclease III. | 0.892 |
ddx51 | ebna1bp2 | ENSLBEP00000034028 | ENSLBEP00000018501 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | EBNA1 binding protein 2. | 0.906 |
ddx51 | ftsj3 | ENSLBEP00000034028 | ENSLBEP00000036254 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.842 |
ddx51 | gtpbp4 | ENSLBEP00000034028 | ENSLBEP00000028309 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.861 |
ddx51 | mtrex | ENSLBEP00000034028 | ENSLBEP00000025425 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | Mtr4 exosome RNA helicase. | 0.850 |
ddx51 | nop58 | ENSLBEP00000034028 | ENSLBEP00000011752 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | NOP58 ribonucleoprotein homolog (yeast). | 0.858 |
ddx51 | pes1 | ENSLBEP00000034028 | ENSLBEP00000015968 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.956 |
ddx51 | rbm8a | ENSLBEP00000034028 | ENSLBEP00000020448 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.857 |
ddx51 | sf3b1 | ENSLBEP00000034028 | ENSLBEP00000029363 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | Splicing factor 3b, subunit 1. | 0.881 |
ddx51 | wdr12 | ENSLBEP00000034028 | ENSLBEP00000011974 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.909 |
drosha | ddx51 | ENSLBEP00000008683 | ENSLBEP00000034028 | Drosha ribonuclease III. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | 0.892 |
drosha | ftsj3 | ENSLBEP00000008683 | ENSLBEP00000036254 | Drosha ribonuclease III. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.822 |
drosha | gtpbp4 | ENSLBEP00000008683 | ENSLBEP00000028309 | Drosha ribonuclease III. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.468 |
drosha | mtrex | ENSLBEP00000008683 | ENSLBEP00000025425 | Drosha ribonuclease III. | Mtr4 exosome RNA helicase. | 0.561 |
drosha | pes1 | ENSLBEP00000008683 | ENSLBEP00000015968 | Drosha ribonuclease III. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.441 |
drosha | rbm8a | ENSLBEP00000008683 | ENSLBEP00000020448 | Drosha ribonuclease III. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.424 |
ebna1bp2 | ddx51 | ENSLBEP00000018501 | ENSLBEP00000034028 | EBNA1 binding protein 2. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. | 0.906 |
ebna1bp2 | ftsj3 | ENSLBEP00000018501 | ENSLBEP00000036254 | EBNA1 binding protein 2. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.997 |
ebna1bp2 | gtpbp4 | ENSLBEP00000018501 | ENSLBEP00000028309 | EBNA1 binding protein 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
ebna1bp2 | mtrex | ENSLBEP00000018501 | ENSLBEP00000025425 | EBNA1 binding protein 2. | Mtr4 exosome RNA helicase. | 0.876 |
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