Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLBEP00000016589 | ppp4c | ENSLBEP00000016589 | ENSLBEP00000038306 | Uncharacterized protein. | Serine/threonine-protein phosphatase. | 0.532 |
ENSLBEP00000016589 | sez6l2 | ENSLBEP00000016589 | ENSLBEP00000034031 | Uncharacterized protein. | Seizure related 6 homolog (mouse)-like 2. | 0.631 |
LOC109991982 | sez6l2 | ENSLBEP00000020393 | ENSLBEP00000034031 | Clat_adaptor_s domain-containing protein. | Seizure related 6 homolog (mouse)-like 2. | 0.680 |
acp5 | acp7 | ENSLBEP00000014169 | ENSLBEP00000035790 | Tartrate-resistant acid phosphatase type 5. | Purple acid phosphatase. | 0.917 |
acp5 | sez6l2 | ENSLBEP00000014169 | ENSLBEP00000034031 | Tartrate-resistant acid phosphatase type 5. | Seizure related 6 homolog (mouse)-like 2. | 0.617 |
acp7 | acp5 | ENSLBEP00000035790 | ENSLBEP00000014169 | Purple acid phosphatase. | Tartrate-resistant acid phosphatase type 5. | 0.917 |
acp7 | sez6l2 | ENSLBEP00000035790 | ENSLBEP00000034031 | Purple acid phosphatase. | Seizure related 6 homolog (mouse)-like 2. | 0.617 |
ap2m1 | sez6l2 | ENSLBEP00000016982 | ENSLBEP00000034031 | AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] | Seizure related 6 homolog (mouse)-like 2. | 0.680 |
eci2 | sez6l2 | ENSLBEP00000027436 | ENSLBEP00000034031 | Enoyl-CoA delta isomerase 2. | Seizure related 6 homolog (mouse)-like 2. | 0.696 |
mars1 | sez6l2 | ENSLBEP00000017701 | ENSLBEP00000034031 | Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Seizure related 6 homolog (mouse)-like 2. | 0.620 |
ndufa8 | sez6l2 | ENSLBEP00000031550 | ENSLBEP00000034031 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Seizure related 6 homolog (mouse)-like 2. | 0.666 |
ppp4c | ENSLBEP00000016589 | ENSLBEP00000038306 | ENSLBEP00000016589 | Serine/threonine-protein phosphatase. | Uncharacterized protein. | 0.532 |
ppp4c | sez6l2 | ENSLBEP00000038306 | ENSLBEP00000034031 | Serine/threonine-protein phosphatase. | Seizure related 6 homolog (mouse)-like 2. | 0.612 |
ppp4c | wdr90 | ENSLBEP00000038306 | ENSLBEP00000020251 | Serine/threonine-protein phosphatase. | WD repeat domain 90. | 0.617 |
sez6l2 | ENSLBEP00000016589 | ENSLBEP00000034031 | ENSLBEP00000016589 | Seizure related 6 homolog (mouse)-like 2. | Uncharacterized protein. | 0.631 |
sez6l2 | LOC109991982 | ENSLBEP00000034031 | ENSLBEP00000020393 | Seizure related 6 homolog (mouse)-like 2. | Clat_adaptor_s domain-containing protein. | 0.680 |
sez6l2 | acp5 | ENSLBEP00000034031 | ENSLBEP00000014169 | Seizure related 6 homolog (mouse)-like 2. | Tartrate-resistant acid phosphatase type 5. | 0.617 |
sez6l2 | acp7 | ENSLBEP00000034031 | ENSLBEP00000035790 | Seizure related 6 homolog (mouse)-like 2. | Purple acid phosphatase. | 0.617 |
sez6l2 | ap2m1 | ENSLBEP00000034031 | ENSLBEP00000016982 | Seizure related 6 homolog (mouse)-like 2. | AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] | 0.680 |
sez6l2 | eci2 | ENSLBEP00000034031 | ENSLBEP00000027436 | Seizure related 6 homolog (mouse)-like 2. | Enoyl-CoA delta isomerase 2. | 0.696 |
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