STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109985847Testis expressed 2. (1195 aa)    
Predicted Functional Partners:
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
     
  0.657
lman1
Lectin, mannose-binding, 1.
    
  0.510
CPEB4
Cytoplasmic polyadenylation element binding protein 4.
     
  0.474
LOC109982502
Cytoplasmic polyadenylation element binding protein 2.
 
   
  0.474
LOC109994433
Cytoplasmic polyadenylation element binding protein 4a.
     
  0.474
LOC109998436
Cytoplasmic polyadenylation element binding protein 3.
     
  0.474
LOC109987559
Uncharacterized protein.
 
   
  0.474
LOC109980843
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.444
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.444
VAPB
VAMP associated protein B and C.
    
 0.417
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.