STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109993294Guanylate cyclase. (1147 aa)    
Predicted Functional Partners:
nppa
Uncharacterized protein.
    
 0.916
guca1b
Guanylate cyclase activator 1B.
  
 0.902
LOC109984790
Guanylate cyclase activator 1C.
  
 0.895
pde6b
Phosphodiesterase.
   
 0.891
nppc
Natriuretic peptide C.
    
 0.891
PDE6C
Phosphodiesterase.
   
 0.886
pde6c
Phosphodiesterase.
   
 0.886
LOC109981176
Phosphodiesterase.
   
 0.885
guca1a
Si:ch211-103a14.5.
  
 0.884
LOC109998852
Guanylate cyclase activator 1A.
  
 0.884
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.