STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109985837Chromobox homolog 8a (Pc class homolog, Drosophila). (369 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
    
 0.956
rnf2
Ring finger protein 2.
    
 0.956
pcgf2
Polycomb group ring finger 2.
    
 0.953
ENSLBEP00000038339
Bmi1 polycomb ring finger oncogene 1a.
    
 0.953
phc3
Uncharacterized protein.
    
 0.946
LOC109999250
Chromobox 4.
    
0.912
LOC109985836
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
0.912
eed
Embryonic ectoderm development.
    
 0.882
LOC109999779
Uncharacterized protein.
    
 0.871
SCML2
Scm polycomb group protein like 2.
    
 0.871
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.