STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110002783Phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog a. (73 aa)    
Predicted Functional Partners:
LOC109982888
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.890
pde6b
Phosphodiesterase.
   
 
 0.880
LOC109981176
Phosphodiesterase.
   
 
 0.880
LOC109982495
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.877
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 
 0.871
LOC109980570
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 
 0.864
LOC109992111
Guanylate cyclase.
   
 
 0.855
LOC109999062
Guanylate cyclase.
   
 
 0.850
LOC109987777
Guanylate kinase 1b.
   
 
  0.849
ENSLBEP00000010156
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
  
 
 
0.835
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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