STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000034823Calponin-homology (CH) domain-containing protein. (232 aa)    
Predicted Functional Partners:
LOC109986402
Afadin, adherens junction formation factor a.
    
 0.888
ENSLBEP00000034803
DUF4757 domain-containing protein.
 
      0.869
ENSLBEP00000021422
DUF4757 domain-containing protein.
 
 
    0.842
commd6
COMM domain containing 6.
     
 0.661
VANGL2
Vang-like protein.
    
 0.659
LOC109999476
Vang-like protein.
    
 0.659
VANGL1
Vang-like protein.
    
 0.659
dvl1
Dishevelled segment polarity protein 1a.
    
 0.657
dvl3
Dishevelled segment polarity protein 3a.
    
 0.657
dvl2
Dishevelled segment polarity protein 2.
    
 0.657
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.