STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnk1Tyrosine kinase, non-receptor, 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (789 aa)    
Predicted Functional Partners:
LOC109994148
Cell division cycle 42.
    
 
 0.809
CDC42
Cell division cycle 42.
    
 
 0.809
grb2
Growth factor receptor bound protein 2.
    
 
 0.751
LOC109976595
Uncharacterized protein.
    
 
 0.751
LOC109995395
Uncharacterized protein.
    
 
 0.741
LOC110003296
Uncharacterized protein.
    
 
 0.741
nck2
Cytoplasmic protein.
    
 
 0.677
nck1
Cytoplasmic protein.
    
 
 0.677
sh3rf3
SH3 domain containing ring finger 3.
    
 
 0.636
LOC109995748
GRB2 related adaptor protein a.
    
 
 0.607
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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