STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trrapTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3852 aa)    
Predicted Functional Partners:
LOC109995253
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.999
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.999
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.999
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.998
sgf29
SAGA complex associated factor 29.
    
 0.998
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.998
supt3h
Uncharacterized protein.
    
 0.998
ENSLBEP00000026974
SPT20 homolog, SAGA complex component.
    
 0.998
LOC109994272
Ubiquitin carboxyl-terminal hydrolase.
    
 0.995
TADA1
Transcriptional adaptor 1.
   
 
 0.994
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.