STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000035145Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
 0.761
LOC109994449
TIMP metallopeptidase inhibitor 2b.
    
 0.573
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.573
LOC109993327
TIMP metallopeptidase inhibitor 2a.
    
 0.573
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.573
col22a1
Collagen, type XXII, alpha 1.
    
  0.521
LOC109988080
Heparin-binding EGF-like growth factor a.
    
  0.519
LOC110004670
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.490
LOC110000245
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.490
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.481
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.