STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109984498Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1005 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor bound protein 2.
   
 0.970
LOC109982075
Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family.
    
 0.945
pxn
Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family.
    
 0.945
LOC109996231
Tyrosine-protein kinase.
   
0.923
egfr
Receptor protein-tyrosine kinase.
    
0.917
LOC109992267
Receptor protein-tyrosine kinase.
    
0.917
SRC
Tyrosine-protein kinase.
   
0.916
erbb2
Receptor protein-tyrosine kinase.
    
0.911
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.910
LOC109976595
Uncharacterized protein.
   
 0.904
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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