STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf151Ring finger protein 151. (242 aa)    
Predicted Functional Partners:
birc6
Baculoviral IAP repeat containing 6.
    
 0.896
ENSLBEP00000032852
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.896
rps27a
Ribosomal protein S27a.
    
 0.859
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.823
tradd
Tnfrsf1a-associated via death domain.
    
 0.808
LOC109976847
Ubiquitin-like domain-containing protein.
    
  0.786
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.786
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.785
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.785
ENSLBEP00000020184
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.784
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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