STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmod4Tropomodulin 4 (muscle). (340 aa)    
Predicted Functional Partners:
LOC109985356
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.790
ENSLBEP00000020415
Uncharacterized protein.
   
 0.742
ENSLBEP00000020697
Uncharacterized protein.
   
 0.742
ENSLBEP00000021264
Uncharacterized protein.
   
 0.742
ENSLBEP00000019483
Uncharacterized protein.
   
 0.675
MYL2
Myosin light chain 2.
   
 
 0.664
LOC109999338
Myosin, light chain 13.
   
 
 0.657
ENSLBEP00000025716
Uncharacterized protein.
   
 
 0.655
LOC109984921
Troponin I type 1a (skeletal, slow).
   
 
 0.643
LOC109981751
Troponin I type 1b (skeletal, slow).
   
 
 0.643
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.