STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctbsChitobiase, di-N-acetyl-; Belongs to the glycosyl hydrolase 18 family. (363 aa)    
Predicted Functional Partners:
ENSLBEP00000007995
Cytochrome c oxidase subunit 7C.
   
 0.941
LOC109992932
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.878
LOC109982060
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.878
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.875
LOC110003937
Uncharacterized protein.
   
 0.875
LOC110000388
Telomerase RNA component interacting RNase.
   
 0.847
TRIR
Telomerase RNA component interacting RNase.
   
 0.847
LOC109993690
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.847
LOC110000059
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.847
LOC109986804
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.847
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.