STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109988034Zgc:153372. (361 aa)    
Predicted Functional Partners:
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.919
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.913
LOC109998600
Hydroxysteroid (17-beta) dehydrogenase 7.
    
 0.847
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.847
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.835
msmo1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.800
LOC109985922
Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family.
   
 0.800
LOC109982241
Cholesterol 25-hydroxylase like 1, tandem duplicate 2; Belongs to the sterol desaturase family.
   
 0.800
ch25h
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.800
ENSLBEP00000036177
Cholesterol 25-hydroxylase like 2; Belongs to the sterol desaturase family.
   
 0.800
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.