STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109995062Guanylate cyclase. (836 aa)    
Predicted Functional Partners:
nppc
Natriuretic peptide C.
    
 0.957
nppa
Uncharacterized protein.
    
 0.954
LOC109981510
Natriuretic peptide B.
    
 0.910
pde5a
Phosphodiesterase.
    
 0.881
pde6b
Phosphodiesterase.
    
 0.875
LOC109981176
Phosphodiesterase.
    
 0.875
pde3b
Phosphodiesterase.
    
 0.874
LOC109999709
Phosphodiesterase.
    
 0.874
pde9a
Phosphodiesterase.
    
 0.870
PDE3A
Phosphodiesterase.
    
 0.857
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.