STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tm9sf4Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (644 aa)    
Predicted Functional Partners:
LOC109993328
SEC24 homolog C, COPII coat complex component.
   
    0.801
tmed10
Transmembrane p24 trafficking protein 10.
   
  
 0.625
ccdc115
Coiled-coil domain containing 115.
    
   0.599
plpp4
Phospholipid phosphatase 4.
    
   0.599
LOC109991583
Phospholipid phosphatase 5.
    
   0.599
LOC110002029
Pleiomorphic adenoma gene-like 2.
   
 
 0.558
eef1aknmt
Methyltransferase like 13.
      
 0.554
LOC109981497
Uncharacterized protein.
    
   0.543
ENSLBEP00000005543
Uncharacterized protein.
   
    0.514
cabcoco1
Uncharacterized protein.
   
    0.514
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.