STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000036963Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
ENSLBEP00000026291
Sema domain-containing protein.
 
      0.899
LOC109981964
Neuropilin; Belongs to the neuropilin family.
    
 0.892
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
 0.842
LOC109984042
Semaphorin 4e; Belongs to the semaphorin family.
    
 0.823
LOC109998617
Si:ch211-129c21.1; Belongs to the semaphorin family.
    
 0.823
LOC109986206
RAP1A, member of RAS oncogene family b.
    
 0.813
LOC109985667
Uncharacterized protein.
    
 0.813
LOC110003002
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.798
sema7a
Semaphorin 7A; Belongs to the semaphorin family.
    
 0.798
LOC109975235
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.798
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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