STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clcn3Chloride channel protein. (743 aa)    
Predicted Functional Partners:
ostm1
Osteoclastogenesis associated transmembrane protein 1.
    
 0.870
lats2
Large tumor suppressor kinase 2.
    
 0.792
lats1
Large tumor suppressor kinase 1.
    
 0.792
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
    
 
 0.672
LOC109986099
Neurofibromin 2a (merlin).
     
 0.666
ENSLBEP00000037505
Neurofibromin 2b (merlin).
     
 0.666
frmd6
FERM domain containing 6.
     
 0.661
LOC109983213
FERM domain containing 1.
     
 0.661
bsnd
Uncharacterized protein.
   
 
 0.628
LOC109995248
Angiomotin.
    
 
 0.626
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.