Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109986596 | LOC109994457 | ENSLBEP00000011923 | ENSLBEP00000031336 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Malate synthase-like. | 0.890 |
LOC109986596 | dap3 | ENSLBEP00000011923 | ENSLBEP00000035485 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Death associated protein 3. | 0.640 |
LOC109986596 | hibch | ENSLBEP00000011923 | ENSLBEP00000037633 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.983 |
LOC109989922 | LOC109994457 | ENSLBEP00000002561 | ENSLBEP00000031336 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Malate synthase-like. | 0.890 |
LOC109989922 | dap3 | ENSLBEP00000002561 | ENSLBEP00000035485 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Death associated protein 3. | 0.640 |
LOC109989922 | hibch | ENSLBEP00000002561 | ENSLBEP00000037633 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.970 |
LOC109994457 | LOC109986596 | ENSLBEP00000031336 | ENSLBEP00000011923 | Malate synthase-like. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.890 |
LOC109994457 | LOC109989922 | ENSLBEP00000031336 | ENSLBEP00000002561 | Malate synthase-like. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.890 |
LOC109994457 | hibch | ENSLBEP00000031336 | ENSLBEP00000037633 | Malate synthase-like. | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.979 |
LOC109994457 | mrps15 | ENSLBEP00000031336 | ENSLBEP00000011825 | Malate synthase-like. | Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. | 0.473 |
LOC109994457 | sod2 | ENSLBEP00000031336 | ENSLBEP00000017979 | Malate synthase-like. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.646 |
dap3 | LOC109986596 | ENSLBEP00000035485 | ENSLBEP00000011923 | Death associated protein 3. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.640 |
dap3 | LOC109989922 | ENSLBEP00000035485 | ENSLBEP00000002561 | Death associated protein 3. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.640 |
dap3 | hibch | ENSLBEP00000035485 | ENSLBEP00000037633 | Death associated protein 3. | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.967 |
dap3 | mrps10 | ENSLBEP00000035485 | ENSLBEP00000019184 | Death associated protein 3. | Mitochondrial ribosomal protein S10. | 0.999 |
dap3 | mrps15 | ENSLBEP00000035485 | ENSLBEP00000011825 | Death associated protein 3. | Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. | 0.999 |
dap3 | mrps35 | ENSLBEP00000035485 | ENSLBEP00000029925 | Death associated protein 3. | Mitochondrial ribosomal protein S35. | 0.999 |
dap3 | mrps5 | ENSLBEP00000035485 | ENSLBEP00000009695 | Death associated protein 3. | Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
dap3 | mrps9 | ENSLBEP00000035485 | ENSLBEP00000008989 | Death associated protein 3. | Mitochondrial ribosomal protein S9. | 0.999 |
dap3 | sod2 | ENSLBEP00000035485 | ENSLBEP00000017979 | Death associated protein 3. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.992 |
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