STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109998487Urea transporter; Belongs to the urea transporter family. (403 aa)    
Predicted Functional Partners:
LOC110001815
Urea transporter; Belongs to the urea transporter family.
  
  
 
0.538
LOC109989436
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
    0.457
LOC109990642
Carboxylesterase 3.
   
    0.457
LOC109996159
Family with sequence similarity 78 member Ba.
   
    0.457
LOC109982749
Family with sequence similarity 78 member Bb.
   
    0.457
fam78a
Family with sequence similarity 78 member Ab.
   
    0.457
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.