STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP58Cilia and flagella associated protein 58. (843 aa)    
Predicted Functional Partners:
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.720
LOC109983404
Im:7152348.
    
  0.674
maats1
CFAP91 domain-containing protein.
  
 
 0.606
ENSLBEP00000005600
Uncharacterized protein.
    
 0.600
ENSLBEP00000005638
IKKbetaNEMObind domain-containing protein.
    
 0.600
LOC109976821
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.600
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.600
ENSLBEP00000009556
TANK-binding kinase 1.
    
 0.600
ENSLBEP00000010578
Protein kinase domain-containing protein.
    
 0.600
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.600
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.