STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109979628Uncharacterized protein. (257 aa)    
Predicted Functional Partners:
LOC109981807
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
  
 0.991
LOC109990749
Cytochrome c oxidase assembly homolog 15 (yeast).
  
 0.983
LOC109982627
Cytochrome c oxidase copper chaperone COX17.
   
 
 0.926
clcc1
Uncharacterized protein.
  
 
 0.912
LOC109984441
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
  
 
 0.904
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 
 0.879
LOC110003937
Uncharacterized protein.
   
 
 0.879
ENSLBEP00000007995
Cytochrome c oxidase subunit 7C.
     
 0.870
LOC110002573
Cytochrome c oxidase subunit 4I1.
     
 0.865
rfc3
Replication factor C (activator 1) 3.
 
      0.865
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.