LOC109979800 protein (Labrus bergylta) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

LOC109979800

Uncharacterized protein. (641 aa)

Predicted Functional Partners:

NCBP1

0.989

ncbp2

0.985

LOC109993875

0.906

mtrex

0.887

phax

0.877

LOC110005683

0.846

ENSLBEP00000016780

0.846

LOC109987761

0.836

sf1

0.816

DDX39A

0.798

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX39A	ENSLBEP00000016780	ENSLBEP00000003671	ENSLBEP00000016780	DExD-box helicase 39A.	RRM domain-containing protein.	0.954
DDX39A	LOC109979800	ENSLBEP00000003671	ENSLBEP00000038807	DExD-box helicase 39A.	Uncharacterized protein.	0.798
DDX39A	LOC109987761	ENSLBEP00000003671	ENSLBEP00000005894	DExD-box helicase 39A.	Heterogeneous nuclear ribonucleoprotein M.	0.658
DDX39A	LOC109993875	ENSLBEP00000003671	ENSLBEP00000030616	DExD-box helicase 39A.	Aly/REF export factor.	0.980
DDX39A	LOC110005683	ENSLBEP00000003671	ENSLBEP00000006957	DExD-box helicase 39A.	RRM domain-containing protein.	0.954
DDX39A	NCBP1	ENSLBEP00000003671	ENSLBEP00000015029	DExD-box helicase 39A.	Nuclear cap binding protein subunit 1.	0.862
DDX39A	mtrex	ENSLBEP00000003671	ENSLBEP00000025425	DExD-box helicase 39A.	Mtr4 exosome RNA helicase.	0.796
DDX39A	ncbp2	ENSLBEP00000003671	ENSLBEP00000026893	DExD-box helicase 39A.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.859
DDX39A	sf1	ENSLBEP00000003671	ENSLBEP00000026198	DExD-box helicase 39A.	Splicing factor 1.	0.665
ENSLBEP00000016780	DDX39A	ENSLBEP00000016780	ENSLBEP00000003671	RRM domain-containing protein.	DExD-box helicase 39A.	0.954
ENSLBEP00000016780	LOC109979800	ENSLBEP00000016780	ENSLBEP00000038807	RRM domain-containing protein.	Uncharacterized protein.	0.846
ENSLBEP00000016780	LOC109987761	ENSLBEP00000016780	ENSLBEP00000005894	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein M.	0.814
ENSLBEP00000016780	LOC109993875	ENSLBEP00000016780	ENSLBEP00000030616	RRM domain-containing protein.	Aly/REF export factor.	0.837
ENSLBEP00000016780	NCBP1	ENSLBEP00000016780	ENSLBEP00000015029	RRM domain-containing protein.	Nuclear cap binding protein subunit 1.	0.966
ENSLBEP00000016780	mtrex	ENSLBEP00000016780	ENSLBEP00000025425	RRM domain-containing protein.	Mtr4 exosome RNA helicase.	0.834
ENSLBEP00000016780	ncbp2	ENSLBEP00000016780	ENSLBEP00000026893	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.968
LOC109979800	DDX39A	ENSLBEP00000038807	ENSLBEP00000003671	Uncharacterized protein.	DExD-box helicase 39A.	0.798
LOC109979800	ENSLBEP00000016780	ENSLBEP00000038807	ENSLBEP00000016780	Uncharacterized protein.	RRM domain-containing protein.	0.846
LOC109979800	LOC109987761	ENSLBEP00000038807	ENSLBEP00000005894	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein M.	0.836
LOC109979800	LOC109993875	ENSLBEP00000038807	ENSLBEP00000030616	Uncharacterized protein.	Aly/REF export factor.	0.906