STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO66227.1Phospholipid methyltransferase protein. (195 aa)    
Predicted Functional Partners:
APO66229.1
Short-chain dehydrogenase/reductase SDR family protein; Protein involved in nucleotide binding and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.805
APO66228.1
Chloramphenicol acetyltransferase-like domain-containing protein.
  
    0.767
APO66226.1
Hypothetical protein.
       0.569
APO68542.1
Cysteine rich repeat domain-containing protein.
  
     0.500
APO67812.1
Hypothetical protein.
 
     0.483
APO68970.1
Phospholipid methyltransferase protein.
  
     0.440
APO68702.1
Protein involved in GTP binding and small GTPase mediated signal transduction.
    
 0.429
APO69186.1
BA14K-like protein.
  
     0.406
Your Current Organism:
Rhizobium gallicum
NCBI taxonomy Id: 56730
Other names: R. gallicum, bacterium ISSDS-850, strain R602sp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.