STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idnK-1Gluconokinase 1; Protein involved in kinase activity, ATP binding and carbohydrate metabolic process. (177 aa)    
Predicted Functional Partners:
gnd
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.953
APO69109.1
6-phosphogluconate dehydrogenase-related protein; Protein involved in nucleotide binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, coenzyme binding and oxidation-reduction process.
   
 0.811
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.810
dppC
Dipeptide ABC transporter permease protein DppC; Protein involved in transporter activity and transport.
       0.683
dppF
Dipeptide ABC transporter ATP-binding protein DppF; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.
       0.683
dppD
Dipeptide ABC transporter ATP-binding protein DppD; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.
       0.678
dppB
Dipeptide ABC transporter permease protein DppB; Protein involved in transporter activity and transport.
       0.612
APO66489.1
NTF2 domain-containing protein.
       0.559
APO68791.1
Protein involved in nucleotide binding, metabolic process and oxidation-reduction process.
 
    
 0.493
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 
 0.438
Your Current Organism:
Rhizobium gallicum
NCBI taxonomy Id: 56730
Other names: R. gallicum, bacterium ISSDS-850, strain R602sp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.