STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO66647.1FAD/FMN-containing dehydrogenase protein; Protein involved in catalytic activity, oxidoreductase activity, flavin adenine dinucleotide binding and oxidation-reduction process. (476 aa)    
Predicted Functional Partners:
APO66648.1
Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.749
APO66649.1
Hypothetical protein.
       0.595
etfB-1
Electron transport flavoprotein subunit beta 1; Protein involved in electron carrier activity.
 
 
 0.579
etfA-1
Electron-transport flavoprotein subunit alpha 1; Protein involved in electron carrier activity and flavin adenine dinucleotide binding.
 
 
 0.577
APO68820.1
Beta-ketoacyl synthase protein; Protein involved in oxidoreductase activity, transferase activity, transferring acyl groups other than amino-acyl groups and metabolic process.
  
 
 0.562
lldD-1
L-lactate dehydrogenase (cytochrome) 1; Protein involved in catalytic activity, oxidoreductase activity and oxidation-reduction process.
 
 0.549
gltB
Glutamate synthase (NADPH) large subunit; Protein involved in catalytic activity, oxidoreductase activity, acting on the CH-NH2 group of donors, nitrogen compound metabolic process and oxidation-reduction process.
     
 0.518
etf-1
Electron transfer flavoprotein-ubiquinone oxidoreductase 1; Accepts electrons from ETF and reduces ubiquinone.
 
  
 0.515
ubiA
4-hydroxybenzoate polyprenyl transferase protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.436
tme
NADP-dependent malic enzyme; Protein involved in nucleotide binding, NAD binding and oxidation-reduction process.
  
  
 0.413
Your Current Organism:
Rhizobium gallicum
NCBI taxonomy Id: 56730
Other names: R. gallicum, bacterium ISSDS-850, strain R602sp
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