STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO67942.1Major facilitator superfamily protein; Protein involved in transmembrane transport. (416 aa)    
Predicted Functional Partners:
APO69663.1
Tartrate transporter protein; Protein involved in transmembrane transport.
  
  
 0.575
APO69366.1
Tartrate transporter protein; Protein involved in transmembrane transport.
  
  
 0.550
trxB
Thioredoxin reductase (NADPH); Protein involved in oxidoreductase activity and oxidation-reduction process.
 
   
 0.495
APO67943.1
Dihydrofolate reductase-like protein; Protein involved in oxidoreductase activity and oxidation-reduction process.
   
   0.478
Your Current Organism:
Rhizobium gallicum
NCBI taxonomy Id: 56730
Other names: R. gallicum, bacterium ISSDS-850, strain R602sp
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