Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APO67976.1 | APO67977.1 | IE4872_CH02362 | IE4872_CH02363 | Polyketide cyclase/dehydrase START-like domain-containing protein. | Glyoxalase/bleomycin resistance protein/dioxygenase family protein. | 0.796 |
APO67976.1 | gnd | IE4872_CH02362 | IE4872_CH02361 | Polyketide cyclase/dehydrase START-like domain-containing protein. | 6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.532 |
APO67977.1 | APO67976.1 | IE4872_CH02363 | IE4872_CH02362 | Glyoxalase/bleomycin resistance protein/dioxygenase family protein. | Polyketide cyclase/dehydrase START-like domain-containing protein. | 0.796 |
APO67977.1 | gnd | IE4872_CH02363 | IE4872_CH02361 | Glyoxalase/bleomycin resistance protein/dioxygenase family protein. | 6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.531 |
gnd | APO67976.1 | IE4872_CH02361 | IE4872_CH02362 | 6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Polyketide cyclase/dehydrase START-like domain-containing protein. | 0.532 |
gnd | APO67977.1 | IE4872_CH02361 | IE4872_CH02363 | 6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Glyoxalase/bleomycin resistance protein/dioxygenase family protein. | 0.531 |