Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APO66933.1 | cusA | IE4872_CH01284 | IE4872_CH02471 | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Cation efflux system protein CusA; Protein involved in cation transmembrane transporter activity and cation transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.528 |
APO68077.1 | APO68080.1 | IE4872_CH02467 | IE4872_CH02470 | Multicopper oxidase domain-containing protein; Protein involved in copper ion binding, oxidoreductase activity and oxidation-reduction process. | Hypothetical protein. | 0.405 |
APO68077.1 | APO68105.1 | IE4872_CH02467 | IE4872_CH02495 | Multicopper oxidase domain-containing protein; Protein involved in copper ion binding, oxidoreductase activity and oxidation-reduction process. | Copper-binding periplasmic protein CusF. | 0.758 |
APO68077.1 | cusA | IE4872_CH02467 | IE4872_CH02471 | Multicopper oxidase domain-containing protein; Protein involved in copper ion binding, oxidoreductase activity and oxidation-reduction process. | Cation efflux system protein CusA; Protein involved in cation transmembrane transporter activity and cation transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.586 |
APO68080.1 | APO68077.1 | IE4872_CH02470 | IE4872_CH02467 | Hypothetical protein. | Multicopper oxidase domain-containing protein; Protein involved in copper ion binding, oxidoreductase activity and oxidation-reduction process. | 0.405 |
APO68080.1 | APO68082.1 | IE4872_CH02470 | IE4872_CH02472 | Hypothetical protein. | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.610 |
APO68080.1 | APO68083.1 | IE4872_CH02470 | IE4872_CH02473 | Hypothetical protein. | FixH family protein. | 0.437 |
APO68080.1 | cusA | IE4872_CH02470 | IE4872_CH02471 | Hypothetical protein. | Cation efflux system protein CusA; Protein involved in cation transmembrane transporter activity and cation transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.639 |
APO68082.1 | APO68080.1 | IE4872_CH02472 | IE4872_CH02470 | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein. | 0.610 |
APO68082.1 | APO68083.1 | IE4872_CH02472 | IE4872_CH02473 | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | FixH family protein. | 0.777 |
APO68082.1 | APO68084.1 | IE4872_CH02472 | IE4872_CH02474 | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein. | 0.531 |
APO68082.1 | cusA | IE4872_CH02472 | IE4872_CH02471 | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Cation efflux system protein CusA; Protein involved in cation transmembrane transporter activity and cation transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.970 |
APO68083.1 | APO68080.1 | IE4872_CH02473 | IE4872_CH02470 | FixH family protein. | Hypothetical protein. | 0.437 |
APO68083.1 | APO68082.1 | IE4872_CH02473 | IE4872_CH02472 | FixH family protein. | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.777 |
APO68083.1 | APO68084.1 | IE4872_CH02473 | IE4872_CH02474 | FixH family protein. | Hypothetical protein. | 0.577 |
APO68083.1 | cusA | IE4872_CH02473 | IE4872_CH02471 | FixH family protein. | Cation efflux system protein CusA; Protein involved in cation transmembrane transporter activity and cation transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.868 |
APO68084.1 | APO68082.1 | IE4872_CH02474 | IE4872_CH02472 | Hypothetical protein. | RND family efflux transporter protein; Protein involved in transmembrane transport; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.531 |
APO68084.1 | APO68083.1 | IE4872_CH02474 | IE4872_CH02473 | Hypothetical protein. | FixH family protein. | 0.577 |
APO68084.1 | cusA | IE4872_CH02474 | IE4872_CH02471 | Hypothetical protein. | Cation efflux system protein CusA; Protein involved in cation transmembrane transporter activity and cation transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.555 |
APO68105.1 | APO68077.1 | IE4872_CH02495 | IE4872_CH02467 | Copper-binding periplasmic protein CusF. | Multicopper oxidase domain-containing protein; Protein involved in copper ion binding, oxidoreductase activity and oxidation-reduction process. | 0.758 |
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