STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gbpRLysR family transcriptional regulator protein GbpR; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family. (334 aa)    
Predicted Functional Partners:
APO68836.1
LysR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
     0.697
APO69187.1
LysR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
     0.636
APO68511.1
Hypothetical protein.
       0.616
APO68513.1
Sugar ABC transporter substrate-binding protein.
 
  
 0.604
APO68516.1
Fumarylacetoacetate hydrolase protein; Protein involved in catalytic activity and metabolic process.
 
     0.602
APO69152.1
LysR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
     0.592
APO66544.1
LysR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
     0.583
APO69113.1
LysR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
     0.577
APO69260.1
LysR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
     0.571
APO66214.1
LysR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family.
  
     0.530
Your Current Organism:
Rhizobium gallicum
NCBI taxonomy Id: 56730
Other names: R. gallicum, bacterium ISSDS-850, strain R602sp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.