STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amaBN-carbamoyl-L-amino acid hydrolase; Protein involved in hydrolase activity and metabolic process. (417 aa)    
Predicted Functional Partners:
dht
Dihydropyrimidinase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides and pyrimidine base catabolic process.
 
 
 0.996
preA
Dihydropyrimidine dehydrogenase subunit B; Protein involved in catalytic activity, iron-sulfur cluster binding, UMP biosynthetic process and oxidation-reduction process.
 
 0.942
APO66059.1
Allantoate amidohydrolase protein; Protein involved in hydrolase activity and metabolic process.
  
  
 
0.919
preT
Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process.
 
 
 0.900
APO68496.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase protein; Protein involved in allantoin biosynthetic process.
   
 0.854
APO66362.1
Aldehyde dehydrogenase (NAD(+)) protein; Protein involved in oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, metabolic process and oxidation-reduction process.
    
 0.802
APO69607.1
Aldehyde dehydrogenase (NAD(+)) protein; Protein involved in oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, metabolic process and oxidation-reduction process.
    
 0.802
APO68649.1
Hypothetical protein.
       0.773
rutR
TetR family transcriptional regulator RutR; Protein involved in DNA binding and negative regulation of transcription, DNA-dependent.
 
     0.656
APO68655.1
NMT1/THI5 like domain-containing protein.
 
   
 0.474
Your Current Organism:
Rhizobium gallicum
NCBI taxonomy Id: 56730
Other names: R. gallicum, bacterium ISSDS-850, strain R602sp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.