Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ04513.1 | SIQ04549.1 | SAMN05421834_101116 | SAMN05421834_101117 | General stress protein 26. | Predicted N-acetyltransferase YhbS. | 0.581 |
SIQ04513.1 | SIQ06767.1 | SAMN05421834_101116 | SAMN05421834_101179 | General stress protein 26. | Protein TonB. | 0.599 |
SIQ04513.1 | SIQ21708.1 | SAMN05421834_101116 | SAMN05421834_102105 | General stress protein 26. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.738 |
SIQ04513.1 | SIQ21754.1 | SAMN05421834_101116 | SAMN05421834_102106 | General stress protein 26. | 5-deoxyglucuronate isomerase. | 0.603 |
SIQ04513.1 | SIQ46446.1 | SAMN05421834_101116 | SAMN05421834_104185 | General stress protein 26. | Translocation and assembly module TamB. | 0.633 |
SIQ04513.1 | SIQ53667.1 | SAMN05421834_101116 | SAMN05421834_10598 | General stress protein 26. | Hypothetical protein. | 0.534 |
SIQ04513.1 | SIR00076.1 | SAMN05421834_101116 | SAMN05421834_11157 | General stress protein 26. | Putative membrane fusion protein. | 0.506 |
SIQ04513.1 | SIR09281.1 | SAMN05421834_101116 | SAMN05421834_11329 | General stress protein 26. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.535 |
SIQ04513.1 | SIR30059.1 | SAMN05421834_101116 | SAMN05421834_11942 | General stress protein 26. | PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.671 |
SIQ04513.1 | SIR51550.1 | SAMN05421834_101116 | SAMN05421834_1324 | General stress protein 26. | Protein kinase domain-containing protein. | 0.594 |
SIQ04549.1 | SIQ04513.1 | SAMN05421834_101117 | SAMN05421834_101116 | Predicted N-acetyltransferase YhbS. | General stress protein 26. | 0.581 |
SIQ06767.1 | SIQ04513.1 | SAMN05421834_101179 | SAMN05421834_101116 | Protein TonB. | General stress protein 26. | 0.599 |
SIQ06767.1 | SIQ46446.1 | SAMN05421834_101179 | SAMN05421834_104185 | Protein TonB. | Translocation and assembly module TamB. | 0.768 |
SIQ06767.1 | SIQ53667.1 | SAMN05421834_101179 | SAMN05421834_10598 | Protein TonB. | Hypothetical protein. | 0.742 |
SIQ06767.1 | SIR00076.1 | SAMN05421834_101179 | SAMN05421834_11157 | Protein TonB. | Putative membrane fusion protein. | 0.765 |
SIQ06767.1 | SIR09281.1 | SAMN05421834_101179 | SAMN05421834_11329 | Protein TonB. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.685 |
SIQ06767.1 | SIR30059.1 | SAMN05421834_101179 | SAMN05421834_11942 | Protein TonB. | PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.819 |
SIQ06767.1 | SIR51550.1 | SAMN05421834_101179 | SAMN05421834_1324 | Protein TonB. | Protein kinase domain-containing protein. | 0.776 |
SIQ21708.1 | SIQ04513.1 | SAMN05421834_102105 | SAMN05421834_101116 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | General stress protein 26. | 0.738 |
SIQ21708.1 | SIQ21754.1 | SAMN05421834_102105 | SAMN05421834_102106 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 5-deoxyglucuronate isomerase. | 0.999 |
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