STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ11848.1General secretion pathway protein G. (147 aa)    
Predicted Functional Partners:
SIQ11886.1
Type IV pilus assembly protein PilC.
 
   
 0.907
SIQ11781.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
  
 0.903
SIQ11917.1
Type IV pilus assembly protein PilB.
 
   
 0.873
SIQ11818.1
Tfp pilus assembly protein FimT.
  
  
 0.847
SIQ12766.1
General secretion pathway protein G.
 
  
0.833
SIQ12734.1
Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A.
 
   
 0.823
SIQ12833.1
Type IV pilus assembly protein PilC.
 
   
 0.818
SIQ12865.1
Twitching motility protein PilT.
 
   
 0.813
SIQ12595.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
  
 0.791
SIQ12901.1
Type IV pilus assembly protein PilB.
 
   
 0.788
Your Current Organism:
Halanaerobium kushneri
NCBI taxonomy Id: 56779
Other names: ATCC 700103, H. kushneri, Haloanaerobium kushneri, strain VS-751
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