Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ11781.1 | SIQ11818.1 | SAMN05421834_101330 | SAMN05421834_101331 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Tfp pilus assembly protein FimT. | 0.869 |
SIQ11781.1 | SIQ11848.1 | SAMN05421834_101330 | SAMN05421834_101332 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | General secretion pathway protein G. | 0.903 |
SIQ11781.1 | SIQ11886.1 | SAMN05421834_101330 | SAMN05421834_101333 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Type IV pilus assembly protein PilC. | 0.565 |
SIQ11781.1 | SIQ11917.1 | SAMN05421834_101330 | SAMN05421834_101334 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Type IV pilus assembly protein PilB. | 0.565 |
SIQ11818.1 | SIQ11781.1 | SAMN05421834_101331 | SAMN05421834_101330 | Tfp pilus assembly protein FimT. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.869 |
SIQ11818.1 | SIQ11848.1 | SAMN05421834_101331 | SAMN05421834_101332 | Tfp pilus assembly protein FimT. | General secretion pathway protein G. | 0.847 |
SIQ11818.1 | SIQ11886.1 | SAMN05421834_101331 | SAMN05421834_101333 | Tfp pilus assembly protein FimT. | Type IV pilus assembly protein PilC. | 0.594 |
SIQ11818.1 | SIQ11917.1 | SAMN05421834_101331 | SAMN05421834_101334 | Tfp pilus assembly protein FimT. | Type IV pilus assembly protein PilB. | 0.478 |
SIQ11818.1 | SIQ12595.1 | SAMN05421834_101331 | SAMN05421834_101354 | Tfp pilus assembly protein FimT. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.565 |
SIQ11818.1 | SIQ12766.1 | SAMN05421834_101331 | SAMN05421834_101359 | Tfp pilus assembly protein FimT. | General secretion pathway protein G. | 0.421 |
SIQ11848.1 | SIQ11781.1 | SAMN05421834_101332 | SAMN05421834_101330 | General secretion pathway protein G. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.903 |
SIQ11848.1 | SIQ11818.1 | SAMN05421834_101332 | SAMN05421834_101331 | General secretion pathway protein G. | Tfp pilus assembly protein FimT. | 0.847 |
SIQ11848.1 | SIQ11886.1 | SAMN05421834_101332 | SAMN05421834_101333 | General secretion pathway protein G. | Type IV pilus assembly protein PilC. | 0.907 |
SIQ11848.1 | SIQ11917.1 | SAMN05421834_101332 | SAMN05421834_101334 | General secretion pathway protein G. | Type IV pilus assembly protein PilB. | 0.873 |
SIQ11848.1 | SIQ12595.1 | SAMN05421834_101332 | SAMN05421834_101354 | General secretion pathway protein G. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.791 |
SIQ11848.1 | SIQ12734.1 | SAMN05421834_101332 | SAMN05421834_101358 | General secretion pathway protein G. | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A. | 0.823 |
SIQ11848.1 | SIQ12766.1 | SAMN05421834_101332 | SAMN05421834_101359 | General secretion pathway protein G. | General secretion pathway protein G. | 0.833 |
SIQ11848.1 | SIQ12833.1 | SAMN05421834_101332 | SAMN05421834_101361 | General secretion pathway protein G. | Type IV pilus assembly protein PilC. | 0.818 |
SIQ11848.1 | SIQ12865.1 | SAMN05421834_101332 | SAMN05421834_101362 | General secretion pathway protein G. | Twitching motility protein PilT. | 0.813 |
SIQ11848.1 | SIQ12901.1 | SAMN05421834_101332 | SAMN05421834_101363 | General secretion pathway protein G. | Type IV pilus assembly protein PilB. | 0.788 |
page 1 of 5