STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ02035.1Uncharacterized protein YhaN. (880 aa)    
Predicted Functional Partners:
SIQ02005.1
DNA repair exonuclease SbcCD nuclease subunit.
 
 
 0.966
SIR51550.1
Protein kinase domain-containing protein.
  
 
   0.772
SIQ01974.1
Hypothetical protein.
       0.738
SIQ74211.1
Tetratricopeptide repeat-containing protein.
  
     0.718
SIQ06727.1
Hypothetical protein.
  
     0.711
SIQ06767.1
Protein TonB.
  
     0.695
SIQ46446.1
Translocation and assembly module TamB.
  
     0.673
SIR09281.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
 
     0.671
SIQ53667.1
Hypothetical protein.
  
     0.668
SIQ39668.1
Replicative DNA helicase.
 
     0.621
Your Current Organism:
Halanaerobium kushneri
NCBI taxonomy Id: 56779
Other names: ATCC 700103, H. kushneri, Haloanaerobium kushneri, strain VS-751
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.