STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ19260.1Protein of unknown function DUF2620. (118 aa)    
Predicted Functional Partners:
SIQ19301.1
PRD domain-containing protein.
 
     0.960
SIQ19348.1
Helix-turn-helix domain-containing protein.
 
     0.959
SIQ19219.1
Protein of unknown function.
 
     0.941
SIQ19130.1
Phosphotriesterase-related protein.
 
     0.910
SIQ19046.1
Predicted amino acid racemase.
 
     0.908
SIQ19176.1
Amidase.
 
     0.898
SIQ19083.1
Aminotransferase class-V.
 
     0.891
SIQ18998.1
Phosphopentomutase.
 
     0.884
SIQ19387.1
O-succinylbenzoate synthase.
       0.491
SIQ19428.1
Alcohol dehydrogenase.
       0.468
Your Current Organism:
Halanaerobium kushneri
NCBI taxonomy Id: 56779
Other names: ATCC 700103, H. kushneri, Haloanaerobium kushneri, strain VS-751
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.