STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ78987.1Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (324 aa)    
Predicted Functional Partners:
SIQ88605.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.973
SIQ79037.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.965
SIQ40655.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.895
SIQ87051.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.881
SIR29813.1
2-keto-3-deoxy-phosphogluconate aldolase.
    
 0.874
SIR36215.1
Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
    
 0.865
SIR01968.1
3-hydroxyisobutyrate dehydrogenase.
 
  
 0.855
SIR36293.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
    
  0.833
SIQ50115.1
Glycolate oxidase.
   
 0.830
SIQ87851.1
Hydroxyacylglutathione hydrolase.
  
 0.820
Your Current Organism:
Halanaerobium kushneri
NCBI taxonomy Id: 56779
Other names: ATCC 700103, H. kushneri, Haloanaerobium kushneri, strain VS-751
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