STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ92482.1Hypothetical protein. (337 aa)    
Predicted Functional Partners:
SIQ40655.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.906
SIQ85427.1
NADP-reducing hydrogenase subunit HndC.
    
 0.868
SIQ92444.1
Hypothetical protein.
 
    0.794
SIR09744.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 
 0.780
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.755
SIQ87311.1
Ferredoxin hydrogenase large subunit.
    
 0.741
SIR36293.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
  
 
 0.738
SIQ55519.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
  0.727
SIQ54020.1
NADH-quinone oxidoreductase subunit F/NADP-reducing hydrogenase subunit HndC.
    
 0.718
SIQ18677.1
Glutamate synthase (NADPH/NADH) small chain.
    
  0.698
Your Current Organism:
Halanaerobium kushneri
NCBI taxonomy Id: 56779
Other names: ATCC 700103, H. kushneri, Haloanaerobium kushneri, strain VS-751
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.