Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ28407.1 | SIQ41324.1 | SAMN05421834_10315 | SAMN05421834_10462 | PAS domain S-box-containing protein. | Methyl-accepting chemotaxis protein. | 0.952 |
SIQ28407.1 | SIR08418.1 | SAMN05421834_10315 | SAMN05421834_1136 | PAS domain S-box-containing protein. | Putative ABC transport system substrate-binding protein. | 0.676 |
SIQ28407.1 | SIR54681.1 | SAMN05421834_10315 | SAMN05421834_1353 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.996 |
SIQ28407.1 | SIR54706.1 | SAMN05421834_10315 | SAMN05421834_1354 | PAS domain S-box-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.997 |
SIQ41324.1 | SIQ28407.1 | SAMN05421834_10462 | SAMN05421834_10315 | Methyl-accepting chemotaxis protein. | PAS domain S-box-containing protein. | 0.952 |
SIQ41324.1 | SIQ63043.1 | SAMN05421834_10462 | SAMN05421834_106105 | Methyl-accepting chemotaxis protein. | Flagellar motor switch protein FliN/FliY. | 0.932 |
SIQ41324.1 | SIR08418.1 | SAMN05421834_10462 | SAMN05421834_1136 | Methyl-accepting chemotaxis protein. | Putative ABC transport system substrate-binding protein. | 0.656 |
SIQ41324.1 | SIR54681.1 | SAMN05421834_10462 | SAMN05421834_1353 | Methyl-accepting chemotaxis protein. | PAS domain S-box-containing protein. | 0.995 |
SIQ41324.1 | SIR54706.1 | SAMN05421834_10462 | SAMN05421834_1354 | Methyl-accepting chemotaxis protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.996 |
SIQ61356.1 | SIR08418.1 | SAMN05421834_10662 | SAMN05421834_1136 | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative ABC transport system substrate-binding protein. | 0.694 |
SIQ61356.1 | SIR54681.1 | SAMN05421834_10662 | SAMN05421834_1353 | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | PAS domain S-box-containing protein. | 0.440 |
SIQ63043.1 | SIQ41324.1 | SAMN05421834_106105 | SAMN05421834_10462 | Flagellar motor switch protein FliN/FliY. | Methyl-accepting chemotaxis protein. | 0.932 |
SIQ63043.1 | SIR08418.1 | SAMN05421834_106105 | SAMN05421834_1136 | Flagellar motor switch protein FliN/FliY. | Putative ABC transport system substrate-binding protein. | 0.678 |
SIQ63043.1 | SIR54681.1 | SAMN05421834_106105 | SAMN05421834_1353 | Flagellar motor switch protein FliN/FliY. | PAS domain S-box-containing protein. | 0.983 |
SIQ63043.1 | SIR54706.1 | SAMN05421834_106105 | SAMN05421834_1354 | Flagellar motor switch protein FliN/FliY. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.979 |
SIR08377.1 | SIR08418.1 | SAMN05421834_1135 | SAMN05421834_1136 | HutP protein. | Putative ABC transport system substrate-binding protein. | 0.500 |
SIR08377.1 | SIR08454.1 | SAMN05421834_1135 | SAMN05421834_1137 | HutP protein. | Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.523 |
SIR08377.1 | SIR08491.1 | SAMN05421834_1135 | SAMN05421834_1138 | HutP protein. | Putative ABC transport system ATP-binding protein. | 0.523 |
SIR08418.1 | SIQ28407.1 | SAMN05421834_1136 | SAMN05421834_10315 | Putative ABC transport system substrate-binding protein. | PAS domain S-box-containing protein. | 0.676 |
SIR08418.1 | SIQ41324.1 | SAMN05421834_1136 | SAMN05421834_10462 | Putative ABC transport system substrate-binding protein. | Methyl-accepting chemotaxis protein. | 0.656 |
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