Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ06694.1 | SIQ40955.1 | SAMN05421834_101177 | SAMN05421834_10454 | S-layer homology domain-containing protein. | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | 0.768 |
SIQ06694.1 | SIQ46446.1 | SAMN05421834_101177 | SAMN05421834_104185 | S-layer homology domain-containing protein. | Translocation and assembly module TamB. | 0.646 |
SIQ06694.1 | SIQ71327.1 | SAMN05421834_101177 | SAMN05421834_10775 | S-layer homology domain-containing protein. | Transcriptional attenuator, LytR family. | 0.664 |
SIQ06694.1 | SIR33517.1 | SAMN05421834_101177 | SAMN05421834_12112 | S-layer homology domain-containing protein. | Protein of unknown function. | 0.773 |
SIQ06694.1 | SIR33551.1 | SAMN05421834_101177 | SAMN05421834_12113 | S-layer homology domain-containing protein. | RNase H-fold protein, predicted Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.758 |
SIQ06694.1 | SIR34028.1 | SAMN05421834_101177 | SAMN05421834_12125 | S-layer homology domain-containing protein. | Stage II sporulation protein. | 0.614 |
SIQ06694.1 | SIR34349.1 | SAMN05421834_101177 | SAMN05421834_12134 | S-layer homology domain-containing protein. | Hypothetical protein. | 0.727 |
SIQ06694.1 | SIR34386.1 | SAMN05421834_101177 | SAMN05421834_12135 | S-layer homology domain-containing protein. | Polysaccharide pyruvyl transferase CsaB. | 0.446 |
SIQ40955.1 | SIQ06694.1 | SAMN05421834_10454 | SAMN05421834_101177 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | S-layer homology domain-containing protein. | 0.768 |
SIQ40955.1 | SIQ46446.1 | SAMN05421834_10454 | SAMN05421834_104185 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | Translocation and assembly module TamB. | 0.802 |
SIQ40955.1 | SIQ95386.1 | SAMN05421834_10454 | SAMN05421834_110108 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | S-layer homology domain-containing protein. | 0.785 |
SIQ40955.1 | SIR33517.1 | SAMN05421834_10454 | SAMN05421834_12112 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | Protein of unknown function. | 0.779 |
SIQ40955.1 | SIR33551.1 | SAMN05421834_10454 | SAMN05421834_12113 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | RNase H-fold protein, predicted Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.749 |
SIQ40955.1 | SIR33586.1 | SAMN05421834_10454 | SAMN05421834_12114 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | S-layer homology domain-containing protein. | 0.787 |
SIQ40955.1 | SIR34028.1 | SAMN05421834_10454 | SAMN05421834_12125 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | Stage II sporulation protein. | 0.593 |
SIQ40955.1 | SIR34349.1 | SAMN05421834_10454 | SAMN05421834_12134 | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | Hypothetical protein. | 0.614 |
SIQ46446.1 | SIQ06694.1 | SAMN05421834_104185 | SAMN05421834_101177 | Translocation and assembly module TamB. | S-layer homology domain-containing protein. | 0.646 |
SIQ46446.1 | SIQ40955.1 | SAMN05421834_104185 | SAMN05421834_10454 | Translocation and assembly module TamB. | LPS export ABC transporter permease LptF/LPS export ABC transporter permease LptG,TIGR04408. | 0.802 |
SIQ46446.1 | SIQ95386.1 | SAMN05421834_104185 | SAMN05421834_110108 | Translocation and assembly module TamB. | S-layer homology domain-containing protein. | 0.719 |
SIQ46446.1 | SIR33517.1 | SAMN05421834_104185 | SAMN05421834_12112 | Translocation and assembly module TamB. | Protein of unknown function. | 0.748 |
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