STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR56560.1Phage recombination protein Bet. (285 aa)    
Predicted Functional Partners:
SIR56457.1
Bacteriophage Mu Gam like protein.
 
     0.847
SIQ93907.1
Beta-lactamase superfamily domain-containing protein.
  
     0.733
SIR51550.1
Protein kinase domain-containing protein.
 
     0.722
SIR56531.1
Hypothetical protein.
       0.701
SIR20863.1
Uncharacterized membrane protein YheB, UPF0754 family.
  
     0.667
SIR29509.1
Hypothetical protein.
  
     0.654
SIQ46446.1
Translocation and assembly module TamB.
  
     0.635
SIQ53667.1
Hypothetical protein.
  
     0.634
SIQ06767.1
Protein TonB.
  
     0.619
SIR56480.1
Protein of unknown function.
 
     0.602
Your Current Organism:
Halanaerobium kushneri
NCBI taxonomy Id: 56779
Other names: ATCC 700103, H. kushneri, Haloanaerobium kushneri, strain VS-751
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.