STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_00480acyl-CoA dehydrogenase, short-chain specific. (383 aa)    
Predicted Functional Partners:
SYN_00481
glutaconyl-CoA decarboxylase A subunit.
 
 0.979
SYN_02637
Electron transfer flavoprotein alpha-subunit.
 
 0.965
SYN_02636
Electron transfer flavoprotein beta-subunit.
 
 0.928
SYN_01431
glutaconyl-CoA decarboxylase beta subunit.
     
 0.908
SYN_00115
Na+-transporting decarboxylase, beta subunit.
     
  0.900
SYN_01434
Na+-translocating decarboxylase, beta subunit.
     
  0.900
SYN_01310
3-hydroxyacyl-CoA dehydrogenase.
 
 0.856
SYN_02642
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.832
SYN_01681
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.794
SYN_02201
Pyruvate dehydrogenase (ferredoxin/flavodoxin-dependent).
  
 0.729
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.