STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_00602Formate dehydrogenase major subunit; Cytochrome b. (186 aa)    
Predicted Functional Partners:
SYN_00603
Formate dehydrogenase major subunit; Cytochrome b; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.990
SYN_00634
Formate dehydrogenase major subunit; Cytochrome b; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.976
SYN_00604
Formate dehydrogenase iron-sulfur subunit; Cytochrome b.
 
 
 0.968
SYN_02138
Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.949
SYN_00629
Formate dehydrogenase, catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.928
SYN_00633
Formate dehydrogenase iron-sulfur subunit; Cytochrome b.
 
 
 0.926
SYN_00605
Formate dehydrogenase, cytochrome b subunit.
 
 
 0.898
SYN_02058
4Fe-4S binding protein.
  
  
 0.868
SYN_00288
Uncharacterized protein involved in formate dehydrogenase formation; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.827
SYN_00734
Uncharacterized protein involved in formate dehydrogenase formation; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.827
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.