STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_00781Hypothetical exported protein. (397 aa)    
Predicted Functional Partners:
SYN_00780
Chain length determinant protein, Wzz-like protein.
 
   
 0.908
SYN_00782
Periplasmic protein involved in polysaccharide export.
 
     0.871
SYN_01097
Hypothetical membrane protein.
 
     0.798
SYN_01204
Chain length determinant protein, Wzz-like protein.
 
   
 0.796
SYN_00779
Tyrosine-protein kinase; Capsular polysaccharide biosynthesis.
 
   
 0.795
SYN_01095
TPR repeat-containing protein.
 
     0.778
SYN_00778
General secretion pathway protein A.
 
     0.750
SYN_01205
Periplasmic protein involved in polysaccharide export.
 
     0.739
SYN_03031
Tyrosine-protein kinase; Capsular polysaccharide biosynthesis.
 
   
 0.664
SYN_01096
Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase.
 
     0.647
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
Server load: low (28%) [HD]