Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SYN_00033 | tatA | SYN_00033 | SYN_00306 | Hypothetical membrane protein. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.625 |
| SYN_00033 | tatA-2 | SYN_00033 | SYN_00926 | Hypothetical membrane protein. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.625 |
| SYN_00927 | tatA-2 | SYN_00927 | SYN_00926 | Hypothetical membrane protein. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.544 |
| SYN_01026 | tatA | SYN_01026 | SYN_00306 | Rhomboid family protein. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.625 |
| SYN_01026 | tatA-2 | SYN_01026 | SYN_00926 | Rhomboid family protein. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.625 |
| SYN_01299 | guaA | SYN_01299 | SYN_01626 | Prephenate dehydratase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.630 |
| SYN_01299 | tatA | SYN_01299 | SYN_00306 | Prephenate dehydratase. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.402 |
| SYN_01299 | tatA-2 | SYN_01299 | SYN_00926 | Prephenate dehydratase. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.402 |
| SYN_01648 | SYN_02426 | SYN_01648 | SYN_02426 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | 0.653 |
| SYN_01648 | tatA | SYN_01648 | SYN_00306 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.431 |
| SYN_01648 | tatA-2 | SYN_01648 | SYN_00926 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.431 |
| SYN_01648 | tatC | SYN_01648 | SYN_00305 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.461 |
| SYN_02426 | SYN_01648 | SYN_02426 | SYN_01648 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | 0.653 |
| SYN_02426 | tatA | SYN_02426 | SYN_00306 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.431 |
| SYN_02426 | tatA-2 | SYN_02426 | SYN_00926 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.431 |
| SYN_02426 | tatC | SYN_02426 | SYN_00305 | NADH:ubiquinone oxidoreductase, NADH-binding subunit; 51 kD. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.461 |
| SYN_02838 | tatA | SYN_02838 | SYN_00306 | Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.437 |
| SYN_02838 | tatA-2 | SYN_02838 | SYN_00926 | Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.437 |
| guaA | SYN_01299 | SYN_01626 | SYN_01299 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Prephenate dehydratase. | 0.630 |
| guaA | tatA | SYN_01626 | SYN_00306 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.947 |
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