STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01242Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (428 aa)    
Predicted Functional Partners:
SYN_01630
Glutamate synthase (NADPH); Belongs to the glutamate synthase family.
  
 0.984
SYN_01410
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.947
SYN_00606
Glutamate synthase (NADPH).
  
 0.940
SYN_01629
Glutamate synthase (NADPH).
  
 
 0.924
SYN_02382
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 
0.919
SYN_01628
Glutamine synthetase.
  
 
 0.916
SYN_02615
Cytochrome c-type protein.
   
 
 0.916
SYN_00664
Glutamate decarboxylase.
   
 
 0.913
argJ
Glutamate N-acetyltransferase / amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.912
SYN_01613
Glutamine synthetase.
     
 0.911
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.