STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01263ABC-type transport system involved in resistance to organic solvents, ATPase component. (413 aa)    
Predicted Functional Partners:
SYN_01262
ABC-type transport system involved in resistance to organic solvents, permease component.
 0.997
SYN_01264
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.995
SYN_00411
ABC-type transport system involved in resistance to organic solvents, permease component.
 0.985
SYN_01690
ABC transporter permease protein.
 
 0.980
SYN_02070
ABC transporter permease protein.
 
 0.976
SYN_01265
Toluene tolerance protein.
 
 
 0.974
SYN_00409
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.952
SYN_01688
Hypothetical membrane protein.
  
 0.935
SYN_02069
ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
  
 
0.917
SYN_00410
ABC-type transport system, ATP-binding component.
  
  
 
0.905
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.