STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_013103-hydroxyacyl-CoA dehydrogenase. (283 aa)    
Predicted Functional Partners:
SYN_01309
enoyl-CoA hydratase.
 0.999
SYN_02642
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
SYN_01681
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.996
SYN_03076
enoyl-CoA dehydratase, putative; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.984
SYN_01653
Putative enoyl-CoA hydratase.
 
 0.969
SYN_00480
acyl-CoA dehydrogenase, short-chain specific.
 
 0.856
SYN_02587
acyl-CoA dehydrogenase, short-chain specific; Mediates the conversion of cyclohex-1-ene-1-carbonyl-CoA into (E)-2-cyclohex-1,5-diene-1-carbonyl-CoA in biosynthesis of cyclohexane- 1-carboxylate, a by-product produced during fermentation of benzoate and crotonate to acetate. Also able to further convert (E)-2-cyclohex- 1,5-diene-1-carbonyl-CoA to benzoyl-CoA.
 
 0.838
SYN_01146
acyl-CoA dehydrogenase.
 
 0.836
SYN_02586
acyl-CoA dehydrogenase, medium-chain specific; Mediates the conversion of cyclohexane-1-carbonyl-CoA into cyclohex-1-ene-1-carbonyl-CoA in biosynthesis of cyclohexane-1- carboxylate, a by-product produced during fermentation of benzoate and crotonate to acetate.
 
 0.830
SYN_01699
acyl-CoA dehydrogenase.
 
 0.821
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.