STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01320Hypothetical cytosolic protein. (89 aa)    
Predicted Functional Partners:
SYN_02853
Adenylate cyclase.
  
     0.717
SYN_01322
Hypothetical cytosolic protein.
       0.605
SYN_03479
Hypothetical cytosolic protein.
       0.605
SYN_02024
Carboxy-terminal processing protease precursor; Belongs to the peptidase S41A family.
  
     0.536
SYN_01323
Hypothetical cytosolic protein.
       0.489
SYN_00141
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
     0.486
SYN_01319
Hypothetical cytosolic protein.
       0.457
SYN_01087
Glutamine amidotransferases class-II.
  
     0.438
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.